5HYS
Structure of IgE complexed with omalizumab
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-03-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 100.103, 107.143, 151.043 |
Unit cell angles | 90.00, 95.18, 90.00 |
Refinement procedure
Resolution | 37.607 - 2.500 |
R-factor | 0.221 |
Rwork | 0.221 |
R-free | 0.23900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4GT7 and 4X7S |
RMSD bond length | 0.003 |
RMSD bond angle | 0.812 |
Data reduction software | HKL-2000 (0.98.691h) |
Data scaling software | HKL-2000 (0.98.691h) |
Phasing software | PHENIX (v1.9) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.610 | 2.589 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.115 | 2.009 |
Number of reflections | 107558 | |
<I/σ(I)> | 22.09 | 1.94 |
Completeness [%] | 97.8 | 95.73 |
Redundancy | 26.9 | 23 |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 294 | 0.2M Lithium Sulfate, 0.1 M Tris pH 8.5, and 41% PEG 400 |