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5HYS

Structure of IgE complexed with omalizumab

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2015-03-11
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97949
Spacegroup nameP 1 21 1
Unit cell lengths100.103, 107.143, 151.043
Unit cell angles90.00, 95.18, 90.00
Refinement procedure
Resolution37.607 - 2.500
R-factor0.221
Rwork0.221
R-free0.23900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4GT7 and 4X7S
RMSD bond length0.003
RMSD bond angle0.812
Data reduction softwareHKL-2000 (0.98.691h)
Data scaling softwareHKL-2000 (0.98.691h)
Phasing softwarePHENIX (v1.9)
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]37.6102.589
High resolution limit [Å]2.5002.500
Rmerge0.1152.009
Number of reflections107558
<I/σ(I)>22.091.94
Completeness [%]97.895.73
Redundancy26.923
CC(1/2)0.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52940.2M Lithium Sulfate, 0.1 M Tris pH 8.5, and 41% PEG 400

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