5GRM
Crystal structure of rat STING in complex with cyclic GMP-AMP with 2'5'and 3'5'phosphodiester linkage(2'3'-cGAMP)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-11-09 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.1000 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 77.200, 77.200, 152.100 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.378 - 1.550 |
R-factor | 0.1815 |
Rwork | 0.181 |
R-free | 0.19290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4loj |
RMSD bond length | 0.035 |
RMSD bond angle | 2.327 |
Data reduction software | XDS |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.600 |
High resolution limit [Å] | 1.550 | 1.550 |
Rmerge | 0.572 | |
Number of reflections | 67310 | 6032 |
<I/σ(I)> | 20.12 | 3.45 |
Completeness [%] | 99.8 | 100 |
Redundancy | 7.14 | 7.14 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 1.8M (NH4)2SO4, 0.1M HEPES pH7.0 |