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5FUY

catalytic domain of Thymidine kinase from Trypanosoma brucei with dTMP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
DetectorDECTRIS PIXEL
Spacegroup nameC 2 2 21
Unit cell lengths87.614, 96.999, 304.431
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution152.220 - 2.800
R-factor0.21019
Rwork0.208
R-free0.24344
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5fuv
RMSD bond length0.012
RMSD bond angle1.595
Data reduction softwareMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]65.0202.950
High resolution limit [Å]2.8002.800
Rmerge0.1000.370
Number of reflections31168
<I/σ(I)>8.52.7
Completeness [%]95.998.7
Redundancy5.64.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
170.15 M DL-MALIC ACID PH 7.0, 20% (W/V) PEG 3350, 1 MM TMP, 1 MM APPNHP, 3 MM MGCL2, PLUS SEEDING

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PDB entries from 2025-06-11

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