5EA5
Crystal Structure of Inhibitor TMC-353121 in Complex with Prefusion RSV F Glycoprotein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-12-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.977 |
Spacegroup name | P 41 3 2 |
Unit cell lengths | 169.860, 169.860, 169.860 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.030 - 3.050 |
R-factor | 0.216 |
Rwork | 0.214 |
R-free | 0.24780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4mms |
RMSD bond length | 0.006 |
RMSD bond angle | 0.882 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.3.11) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.030 | 49.030 | 3.260 |
High resolution limit [Å] | 3.050 | 8.630 | 3.050 |
Rmerge | 0.317 | 0.038 | 2.379 |
Rpim | 0.064 | 0.008 | 0.498 |
Total number of observations | 418216 | 20487 | 69015 |
Number of reflections | 16585 | ||
<I/σ(I)> | 11.9 | 56.2 | 1.6 |
Completeness [%] | 100.0 | 99.5 | 100 |
Redundancy | 25.2 | 24.1 | 23.5 |
CC(1/2) | 0.997 | 1.000 | 0.544 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 293 | 1.54 M potassium/sodium tartrate, 0.2 M lithium sulfate, 0.1 M CHES, pH 9.5 |