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5E6J

Structure of SARS PLpro bound to a Lys48-linked di-ubiquitin activity based probe

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2015-02-25
DetectorADSC QUANTUM 315
Wavelength(s)0.979100
Spacegroup nameP 1 21 1
Unit cell lengths72.981, 68.239, 119.021
Unit cell angles90.00, 103.21, 90.00
Refinement procedure
Resolution49.216 - 2.850
R-factor0.234
Rwork0.232
R-free0.26430
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4mm3 1ubq
RMSD bond length0.003
RMSD bond angle0.601
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.950
High resolution limit [Å]2.8502.850
Rmerge0.0700.530
Number of reflections26147
<I/σ(I)>13.991.97
Completeness [%]98.0100
Redundancy3.33
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52850.1 M MES, 0.1 M lithium acetate, 17% PEG 6000

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