5DTD
Crystal structure of Fis bound to 27bp DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-03-04 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97949 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.280, 93.200, 154.270 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.609 - 2.642 |
R-factor | 0.2197 |
Rwork | 0.216 |
R-free | 0.25190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3iv5 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.102 |
Data scaling software | Aimless (0.5.14) |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 79.770 | 79.770 | 2.780 |
High resolution limit [Å] | 2.640 | 8.350 | 2.640 |
Rmerge | 0.049 | 0.020 | 0.583 |
Rpim | 0.029 | 0.013 | 0.345 |
Total number of observations | 71833 | 2249 | 9702 |
Number of reflections | 18446 | ||
<I/σ(I)> | 17.2 | 38.3 | 2.7 |
Completeness [%] | 96.5 | 97.6 | 89.9 |
Redundancy | 3.9 | 3.3 | 4 |
CC(1/2) | 0.999 | 0.999 | 0.813 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 277 | 0.2 M Sodium citrate, 0.1 M TRIS-HCl pH 8.5, 36% PEG 400 |