Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5DTD

Crystal structure of Fis bound to 27bp DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2011-03-04
DetectorADSC QUANTUM 315
Wavelength(s)0.97949
Spacegroup nameP 21 21 21
Unit cell lengths43.280, 93.200, 154.270
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.609 - 2.642
R-factor0.2197
Rwork0.216
R-free0.25190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3iv5
RMSD bond length0.008
RMSD bond angle1.102
Data scaling softwareAimless (0.5.14)
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]79.77079.7702.780
High resolution limit [Å]2.6408.3502.640
Rmerge0.0490.0200.583
Rpim0.0290.0130.345
Total number of observations7183322499702
Number of reflections18446
<I/σ(I)>17.238.32.7
Completeness [%]96.597.689.9
Redundancy3.93.34
CC(1/2)0.9990.9990.813
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52770.2 M Sodium citrate, 0.1 M TRIS-HCl pH 8.5, 36% PEG 400

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon