5DOU
Crystal Structure of Human Carbamoyl phosphate synthetase I (CPS1), ligand-bound form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-11-21 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97947 |
Spacegroup name | P 1 |
Unit cell lengths | 78.919, 98.558, 214.890 |
Unit cell angles | 90.66, 98.65, 90.08 |
Refinement procedure
Resolution | 40.000 - 2.600 |
R-factor | 0.1967 |
Rwork | 0.195 |
R-free | 0.22920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dot |
RMSD bond length | 0.011 |
RMSD bond angle | 1.404 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 39.982 | 2.740 |
High resolution limit [Å] | 2.600 | 8.220 | 2.600 |
Rmerge | 0.036 | 0.321 | |
Rmeas | 0.111 | ||
Rpim | 0.076 | 0.033 | 0.318 |
Total number of observations | 329157 | 11118 | 40514 |
Number of reflections | 178654 | ||
<I/σ(I)> | 7.9 | 15.7 | 3 |
Completeness [%] | 90.7 | 90.7 | 84.9 |
Redundancy | 1.8 | 2 | 1.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.2 | 277 | 0.4 M MgCl2, 0.2 M ammonium tartrate |