5DOH
Crystal structure of human carbonic anhydrase isozyme II with 2-[(1S)-2,3-Dihydro-1H-inden-1-ylamino]-3,5,6-trifluoro-4-[(2-hydroxyethyl)thio]benzenesulfonamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-12-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.826606 |
Spacegroup name | P 1 |
Unit cell lengths | 42.162, 41.157, 71.854 |
Unit cell angles | 90.00, 104.19, 90.00 |
Refinement procedure
Resolution | 69.660 - 1.050 |
R-factor | 0.147 |
Rwork | 0.144 |
R-free | 0.17200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hlj |
RMSD bond length | 0.022 |
RMSD bond angle | 2.307 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 69.661 | 69.660 | 1.110 |
High resolution limit [Å] | 1.050 | 3.320 | 1.050 |
Rmerge | 0.024 | 0.271 | |
Rmeas | 0.044 | 0.030 | 0.380 |
Rpim | 0.023 | 0.020 | 0.190 |
Total number of observations | 735878 | 23431 | 103595 |
Number of reflections | 195453 | ||
<I/σ(I)> | 17.1 | 44.6 | 3.7 |
Completeness [%] | 89.4 | 92.9 | 86.7 |
Redundancy | 3.8 | 3.7 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | Crystallization buffer: 0.1M sodium BICINE, pH 9, 0.2 M ammonium sulfate and 2M sodium malonate pH 7 made from 1M sodium BICINE and 3.4M sodium malonate |