Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5D6E

Structure of human methionine aminopeptidase 2 with covalent spiroepoxytriazole inhibitor (-)-31b

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-05-18
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.07160
Spacegroup nameC 2 2 21
Unit cell lengths89.600, 98.790, 101.430
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.490
R-factor0.11248
Rwork0.110
R-free0.15559
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5cls
RMSD bond length0.019
RMSD bond angle1.873
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.529
High resolution limit [Å]1.4901.490
Rmerge0.0530.740
Number of reflections73029
<I/σ(I)>13.942.17
Completeness [%]99.399.6
Redundancy4.333.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.4292Na Citrate, Tert-butanol

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon