5BWN
Crystal Structure of SIRT3 with a H3K9 Peptide Containing a Myristoyl Lysine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-21 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.102, 54.691, 117.257 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.279 - 1.942 |
R-factor | 0.2308 |
Rwork | 0.226 |
R-free | 0.27450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3glt |
RMSD bond length | 0.007 |
RMSD bond angle | 0.955 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.990 |
High resolution limit [Å] | 1.940 | 1.940 |
Rmerge | 0.077 | |
Number of reflections | 21698 | |
<I/σ(I)> | 18.2 | 5.2 |
Completeness [%] | 96.0 | 97.8 |
Redundancy | 11.98 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 0.2M Ammonium tartrate dibasic (pH 7.0), 20% w/v PEG 3350, 0.01M Urea |