5A3P
Crystal structure of the catalytic domain of human PLU1 (JARID1B).
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-07 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 141.788, 141.788, 152.272 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.559 - 2.008 |
R-factor | 0.1893 |
Rwork | 0.187 |
R-free | 0.22420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5a1f |
RMSD bond length | 0.008 |
RMSD bond angle | 1.064 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.560 | 2.060 |
High resolution limit [Å] | 2.010 | 2.010 |
Rmerge | 0.120 | 0.870 |
Number of reflections | 60551 | |
<I/σ(I)> | 17.1 | 3.7 |
Completeness [%] | 99.9 | 98.8 |
Redundancy | 19.9 | 20.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 8 | 0.1M HEPES PH 8.0, 0.8M POTASSIUM PHOSPHATE-DIBASIC, 0.8M SODIUM PHOSPHATE MONOBASIC |