5ZTN
The crystal structure of human DYRK2 in complex with Curcumin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-01 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.979 |
Spacegroup name | P 42 |
Unit cell lengths | 83.659, 83.659, 149.127 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.275 - 2.496 |
R-factor | 0.1997 |
Rwork | 0.197 |
R-free | 0.24440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3k2l |
RMSD bond length | 0.009 |
RMSD bond angle | 1.246 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.275 | 2.500 |
High resolution limit [Å] | 2.496 | 2.496 |
Rpim | 0.052 | 0.632 |
Number of reflections | 35490 | |
<I/σ(I)> | 21.8 | |
Completeness [%] | 99.8 | |
Redundancy | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 0.2 M ammonium citrate tribasic, 12%-20% PEG 3350,pH 7.0 |