5XH6
Crystal structure of the Acidaminococcus sp. BV3L6 Cpf1 RVR variant in complex with crRNA and target DNA (TATA PAM)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL41XU |
| Synchrotron site | SPring-8 |
| Beamline | BL41XU |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-12-18 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 81.162, 133.676, 199.633 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 39.990 - 2.000 |
| R-factor | 0.1767 |
| Rwork | 0.175 |
| R-free | 0.20990 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5b43 |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.843 |
| Data reduction software | DIALS |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 39.990 | 2.023 |
| High resolution limit [Å] | 2.000 | 2.000 |
| Rpim | 0.396 | |
| Number of reflections | 143997 | |
| <I/σ(I)> | 17.1 | |
| Completeness [%] | 98.2 | |
| Redundancy | 6.6 | |
| CC(1/2) | 0.813 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 7-10% PEG 3350, 100mM sodium acetate, pH 4.5, 10% 1,6-hexanediol |






