5X08
Crystal structure of broadly neutralizing anti-HIV-1 antibody 4E10, mutant Npro, with peptide bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-01 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.979133 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 157.509, 44.500, 85.130 |
Unit cell angles | 90.00, 113.70, 90.00 |
Refinement procedure
Resolution | 22.250 - 1.490 |
R-factor | 0.12977 |
Rwork | 0.129 |
R-free | 0.16870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wy7 |
RMSD bond length | 0.016 |
RMSD bond angle | 1.617 |
Data reduction software | MOSFLM (7.1.0) |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER (2.5.6) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 22.250 | 1.570 |
High resolution limit [Å] | 1.490 | 1.490 |
Rmerge | 0.081 | 0.770 |
Rpim | 0.035 | 0.344 |
Number of reflections | 88101 | 12788 |
<I/σ(I)> | 11.9 | 2.4 |
Completeness [%] | 99.5 | 99.5 |
Redundancy | 6 | 5.8 |
CC(1/2) | 0.998 | 0.666 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 291.15 | 100mM sodium acetate; 34% PEG4000; 225mM ammonium acetate |