5W5K
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with KV70
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS-II BEAMLINE 17-ID-1 |
| Synchrotron site | NSLS-II |
| Beamline | 17-ID-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-03-02 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9793 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 101.290, 170.940, 151.370 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 87.141 - 2.700 |
| R-factor | 0.2077 |
| Rwork | 0.204 |
| R-free | 0.21950 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5eem |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.783 |
| Data reduction software | iMOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((dev_2776: ???)) |
Data quality characteristics
| Overall | |
| Low resolution limit [Å] | 87.141 |
| High resolution limit [Å] | 2.700 |
| Number of reflections | 34541 |
| <I/σ(I)> | 5.5 |
| Completeness [%] | 95.5 |
| Redundancy | 2.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 277 | magnesium acetate, HEPES (pH 7.5), PEG 8,000 |






