5TZF
Structure of the BldD CTD(D116A)-(c-di-GMP)2 intermediate, form 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-21 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 87.133, 93.061, 94.094 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 66.166 - 2.400 |
R-factor | 0.2315 |
Rwork | 0.229 |
R-free | 0.27190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5tzd |
RMSD bond length | 0.011 |
RMSD bond angle | 1.096 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.6.4_486) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 66.200 | 2.530 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.320 | |
Number of reflections | 30442 | |
<I/σ(I)> | 12.4 | 3.6 |
Completeness [%] | 99.6 | 68.3 |
Redundancy | 3 | 3 |
CC(1/2) | 0.998 | 0.908 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 1.6 M sodium/potassium phosphate, 100 mM Tris pH 7.5 |