5OWP
Crystal structure of glycopeptide "GVTSAfPDT*RPAP" in complex with scFv-SM3
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04 |
| Synchrotron site | Diamond |
| Beamline | I04 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-02-12 |
| Detector | DECTRIS PILATUS3 S 6M |
| Wavelength(s) | 0.97 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 35.399, 68.151, 90.358 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 90.360 - 1.850 |
| R-factor | 0.19599 |
| Rwork | 0.194 |
| R-free | 0.25614 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5a2k |
| RMSD bond length | 0.017 |
| RMSD bond angle | 1.854 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 90.360 | 1.950 |
| High resolution limit [Å] | 1.850 | 1.850 |
| Rpim | 0.049 | 0.394 |
| Number of reflections | 19335 | |
| <I/σ(I)> | 10.9 | 1.9 |
| Completeness [%] | 99.7 | 99.8 |
| Redundancy | 6.4 | 6.3 |
| CC(1/2) | 0.998 | 0.685 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291 | PEG 3350, disodium hydrogen phosphate |






