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5ONH

Quaternary complex of wild type E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyCCD
Collection date2015-06-15
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.8726
Spacegroup nameC 1 2 1
Unit cell lengths159.110, 70.380, 229.830
Unit cell angles90.00, 104.47, 90.00
Refinement procedure
Resolution222.540 - 3.100
R-factor0.22427
Rwork0.223
R-free0.25725
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4aq7
RMSD bond length0.006
RMSD bond angle0.906
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.210
High resolution limit [Å]3.1003.100
Number of reflections449974316
<I/σ(I)>7.81.2
Completeness [%]99.496.2
Redundancy3.83.5
CC(1/2)0.9900.400
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52930.1 M BIS-TRIS PH 5.5, 23-25% W/V PEG 3350, AND 200 MM AMMONIUM ACETATE

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PDB entries from 2024-05-15

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