Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5OHK

Crystal structure of USP30 in covalent complex with ubiquitin propargylamide (high resolution)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2016-02-03
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.979490
Spacegroup nameP 21 2 21
Unit cell lengths50.917, 94.408, 96.115
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution67.352 - 2.340
R-factor0.2308
Rwork0.229
R-free0.26050
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2hd5
RMSD bond length0.003
RMSD bond angle0.525
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2155))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]67.3522.424
High resolution limit [Å]2.3402.340
Rmerge0.1700.715
Rpim0.0920.380
Number of reflections201311978
<I/σ(I)>4.611.86
Completeness [%]99.298.9
Redundancy4.24
CC(1/2)0.9830.848
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.429110% (w/v) PEG 20000, 0.1 M sodium citrate pH 5.4, 0.2 M lithium sulfate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon