5N47
Structure of Anticalin N7E in complex with the three-domain fragment Fn7B8 of human oncofetal fibronectin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.2 |
| Synchrotron site | BESSY |
| Beamline | 14.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-07-24 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.91841 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 135.148, 135.148, 203.939 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 35.000 - 3.000 |
| R-factor | 0.2096 |
| Rwork | 0.208 |
| R-free | 0.24100 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4gh7 |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.308 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 35.000 | 35.000 | 3.100 |
| High resolution limit [Å] | 3.000 | 10.000 | 3.000 |
| Rmerge | 0.124 | 0.030 | 1.059 |
| Rmeas | 0.129 | 0.031 | 1.096 |
| Total number of observations | 564576 | ||
| Number of reflections | 38486 | 1145 | 3528 |
| <I/σ(I)> | 21.7 | 59.53 | 3.08 |
| Completeness [%] | 99.9 | 96.5 | 100 |
| Redundancy | 14.67 | 11.997 | 15.065 |
| CC(1/2) | 0.999 | 1.000 | 0.888 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | 17 % (w/v) PEG3350, 0.2 M NaCl, 0.1 M Na-malonate |






