5LIA
Crystal structure of murine autotaxin in complex with a small molecule inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-07-22 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 |
Unit cell lengths | 61.160, 61.580, 66.140 |
Unit cell angles | 85.77, 72.68, 80.21 |
Refinement procedure
Resolution | 50.000 - 1.920 |
R-factor | 0.16191 |
Rwork | 0.160 |
R-free | 0.20115 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nkm |
RMSD bond length | 0.019 |
RMSD bond angle | 1.920 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.660 | 1.970 |
High resolution limit [Å] | 1.920 | 1.920 |
Rmerge | 0.065 | 0.595 |
Number of reflections | 67396 | |
<I/σ(I)> | 11.1 | 2.2 |
Completeness [%] | 97.2 | 96 |
Redundancy | 3.9 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 20-25% PEG3350, 0.5M KSCN, 0.2mM ZnSO4, 1% (w/v) polyvinylpyrrolidone K15 |