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5LHC

The structure of D456A mutant of Nt.BspD6I nicking endonuclease at 0.24 nm resolution .

Replaces:  4WL5
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyCCD
Collection date2016-04-15
DetectorADSC QUANTUM 315r
Wavelength(s)0.96863
Spacegroup nameP 1 21 1
Unit cell lengths76.350, 92.666, 113.969
Unit cell angles90.00, 105.75, 90.00
Refinement procedure
Resolution19.000 - 2.400
R-factor0.19872
Rwork0.195
R-free0.26539
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ewf
RMSD bond length0.015
RMSD bond angle1.780
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]109.7002.490
High resolution limit [Å]2.4002.400
Rmerge0.0900.610
Number of reflections59826
<I/σ(I)>9.8
Completeness [%]99.599.4
Redundancy3.63.5
CC(1/2)0.024
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.429316% PEG 8000 40MM POTASSIUM PHOSPHATE 20% GLYCEROL

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