5JWP
Crystal structure of human FIH D201E variant in complex with Zn, alpha-ketoglutarate, and HIF1 alpha peptide.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X6A |
Synchrotron site | NSLS |
Beamline | X6A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-03 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.08 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 86.220, 86.220, 149.903 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.370 - 2.100 |
R-factor | 0.1727 |
Rwork | 0.170 |
R-free | 0.20870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1h2l |
RMSD bond length | 0.019 |
RMSD bond angle | 1.904 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.140 |
High resolution limit [Å] | 2.100 | 5.700 | 2.100 |
Rmerge | 0.070 | 0.043 | |
Number of reflections | 33713 | ||
<I/σ(I)> | 11.6 | ||
Completeness [%] | 99.5 | 95.3 | 99.8 |
Redundancy | 5.2 | 4.6 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.1M Hepes, 1.6mM ammonium sulfate, 3% PEG 400 |