5FQD
Structural basis of Lenalidomide induced CK1a degradation by the crl4crbn ubiquitin ligase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-03-20 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 1 |
Unit cell lengths | 87.970, 109.930, 112.400 |
Unit cell angles | 106.02, 93.19, 101.63 |
Refinement procedure
Resolution | 65.300 - 2.450 |
R-factor | 0.182 |
Rwork | 0.181 |
R-free | 0.21000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ei3 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.180 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.6) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.300 | 2.580 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.080 | 1.500 |
Number of reflections | 140745 | |
<I/σ(I)> | 8.7 | 0.8 |
Completeness [%] | 97.3 | 96.5 |
Redundancy | 3.6 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 70 MM TRIS PH 7.0 140 MM MGCL2 7% W/V PEG 8000 |