5EAL
Crystal structure of human WDR5 in complex with compound 9h
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-01-13 |
Detector | RIGAKU RAXIS HTC |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 |
Unit cell lengths | 47.191, 60.962, 64.126 |
Unit cell angles | 110.67, 90.43, 109.47 |
Refinement procedure
Resolution | 50.000 - 1.800 |
R-factor | 0.1792 |
Rwork | 0.178 |
R-free | 0.21060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ur4 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.378 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.830 |
High resolution limit [Å] | 1.800 | 4.880 | 1.800 |
Rmerge | 0.071 | 0.031 | 0.618 |
Total number of observations | 215444 | ||
Number of reflections | 54564 | ||
<I/σ(I)> | 9.5 | ||
Completeness [%] | 94.2 | 99.1 | 90.5 |
Redundancy | 3.9 | 3.9 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | 20% PEG 5K MME, 0.1 M BisTris pH6.5 |