5D6E
Structure of human methionine aminopeptidase 2 with covalent spiroepoxytriazole inhibitor (-)-31b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-05-18 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.07160 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 89.600, 98.790, 101.430 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.490 |
R-factor | 0.11248 |
Rwork | 0.110 |
R-free | 0.15559 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5cls |
RMSD bond length | 0.019 |
RMSD bond angle | 1.873 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.529 |
High resolution limit [Å] | 1.490 | 1.490 |
Rmerge | 0.053 | 0.740 |
Number of reflections | 73029 | |
<I/σ(I)> | 13.94 | 2.17 |
Completeness [%] | 99.3 | 99.6 |
Redundancy | 4.33 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.4 | 292 | Na Citrate, Tert-butanol |