5CG5
Neutron crystal structure of human farnesyl pyrophosphate synthase in complex with risedronate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 293 |
Detector technology | CCD |
Collection date | 2013-11-17 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 111.966, 111.966, 72.754 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 53.570 - 2.400 |
R-factor | 0.1878 |
Rwork | 0.186 |
R-free | 0.22920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yv5 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.919 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.070 | 2.490 | 1.420 |
High resolution limit [Å] | 1.400 | 2.400 | 1.400 |
Rmerge | 0.062 | 0.612 | 0.482 |
Number of reflections | 87200 | ||
Completeness [%] | 96.2 | 98 | 95.9 |
Redundancy | 7.1 | 2.7 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 0.5M NaCl, 0.1M acetate buffer |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 0.5M NaCl, 0.1M acetate buffer |