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5CAY

Envelope glycoprotein gp120 core from HIV type 2 bound to the first two domains of human soluble CD4 receptor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2014-01-23
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0332
Spacegroup nameC 2 2 21
Unit cell lengths94.276, 100.223, 199.139
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution99.570 - 3.000
R-factor0.23545
Rwork0.231
R-free0.28673
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2nxy 3lqa
RMSD bond length0.008
RMSD bond angle1.486
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0123)
Data quality characteristics
 Overall
Low resolution limit [Å]99.570
High resolution limit [Å]3.000
Rmerge0.081
Rpim0.042
Number of reflections19116
<I/σ(I)>12.8
Completeness [%]99.2
Redundancy4.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72930.15M DL-Malic acid 7.0, 0.1M imidazole pH 7.0, 22% PEGMME 550

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