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5BTD

Crystal structure of a topoisomerase II complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyCCD
Collection date2014-12-07
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.033
Spacegroup nameP 1 21 1
Unit cell lengths107.907, 83.158, 129.203
Unit cell angles90.00, 108.65, 90.00
Refinement procedure
Resolution47.394 - 2.497
R-factor0.2162
Rwork0.215
R-free0.24640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5bs8
RMSD bond length0.004
RMSD bond angle0.741
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.3942.586
High resolution limit [Å]2.49711.1702.497
Rmerge0.1370.019
Rmeas0.1580.0271.727
Total number of observations285078
Number of reflections285133156710299
<I/σ(I)>10.3632.281.1
Completeness [%]99.793.497.56
Redundancy3.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP294100 mM Tris-HCl, 13-15% PEG 4000, 200 mM MgCl2, 6.25% PEG 400

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