5AJP
Crystal structure of the active form of GalNAc-T2 in complex with UDP and the glycopeptide MUC5AC-13
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Detector | DECTRIS PILATUS |
| Spacegroup name | I 41 |
| Unit cell lengths | 87.266, 87.266, 178.590 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 89.290 - 1.650 |
| R-factor | 0.15682 |
| Rwork | 0.156 |
| R-free | 0.18558 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4d0t |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.627 |
| Data reduction software | XDS |
| Data scaling software | SCALEPACK |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 | 1.740 |
| High resolution limit [Å] | 1.650 | 1.650 |
| Rmerge | 0.040 | 0.600 |
| Number of reflections | 79709 | |
| <I/σ(I)> | 22.1 | 2.9 |
| Completeness [%] | 99.8 | 99.2 |
| Redundancy | 6.7 | 5.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 |
