Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Z2E

Quinolone(Trovafloxacin)-DNA cleavage complex of gyrase from S. pneumoniae

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2014-04-24
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9795
Spacegroup nameP 21 21 21
Unit cell lengths94.190, 96.620, 275.210
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution56.045 - 3.460
R-factor0.2496
Rwork0.247
R-free0.29220
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3raf 4i3h
RMSD bond length0.001
RMSD bond angle0.458
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.8_1069)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]56.0453.460
High resolution limit [Å]3.3703.370
Rmerge0.0690.610
Number of reflections36263
<I/σ(I)>8.34581.28
Completeness [%]99.799.51
Redundancy6.666.75
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52975-10% PEG 8000, 10-20% Ethylene glycol, 0.1M Imidazole/MES buffer system, 0.1M Amino Acids

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon