4Z0V
The structure of human PDE12 residues 161-609
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-07-31 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.9787 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.688, 62.554, 65.393 |
Unit cell angles | 90.00, 110.40, 90.00 |
Refinement procedure
Resolution | 43.780 - 1.780 |
R-factor | 0.1657 |
Rwork | 0.165 |
R-free | 0.20100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ng0 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.010 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.5.4) |
Refinement software | BUSTER (2.11.6) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.840 |
High resolution limit [Å] | 1.780 | 3.830 | 1.780 |
Rmerge | 0.073 | 0.035 | 0.402 |
Rmeas | 0.040 | 0.470 | |
Rpim | 0.021 | 0.242 | |
Number of reflections | 41250 | ||
<I/σ(I)> | 16.694 | ||
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 3.8 | 3.7 | 3.8 |
CC(1/2) | 0.998 | 0.863 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.2M MgCl2 0.1M Tris pH 8.5 24% PEG 3350 |