4Y2H
Crystal structure of human protein arginine methyltransferase PRMT6 bound to SAH and an aryl pyrazole inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-11-02 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97856 |
Spacegroup name | P 43 |
Unit cell lengths | 99.970, 99.970, 89.490 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.740 - 2.370 |
R-factor | 0.1842 |
Rwork | 0.182 |
R-free | 0.23150 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.444 |
Data scaling software | Aimless (0.1.28) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 27.740 | 27.740 | 2.430 |
High resolution limit [Å] | 2.370 | 10.600 | 2.370 |
Rmerge | 0.144 | 0.036 | 0.594 |
Rpim | 0.073 | 0.018 | 0.371 |
Total number of observations | 175169 | 1867 | 9279 |
Number of reflections | 35874 | ||
<I/σ(I)> | 10.5 | 28.9 | 2.2 |
Completeness [%] | 99.9 | 95 | 99.8 |
Redundancy | 4.9 | 4.6 | 3.5 |
CC(1/2) | 0.991 | 0.998 | 0.665 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | MgCl, MES buffer pH 6.5, Isopropanol, PEG 4000 |