4Y1T
Structural basis for Ca2+-mediated interaction of the perforin C2 domain with lipid membranes
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-12-04 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.953697 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 45.009, 59.828, 125.919 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 42.383 - 2.666 |
| R-factor | 0.1709 |
| Rwork | 0.168 |
| R-free | 0.21530 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3nsj |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.648 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 42.388 | 2.810 |
| High resolution limit [Å] | 2.666 | 2.666 |
| Rmerge | 0.071 | 0.182 |
| Number of reflections | 5115 | |
| <I/σ(I)> | 21.25 | |
| Completeness [%] | 99.7 | |
| Redundancy | 2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.1 M HEPES sodium pH 7.5, 0.2 M calcium chloride dihydrate and 14% v/v polyethylene glycol 400 |






