4XKL
Crystal structure of NDP52 ZF2 in complex with mono-ubiquitin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-01-15 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 83.950, 73.800, 39.700 |
Unit cell angles | 90.00, 108.49, 90.00 |
Refinement procedure
Resolution | 36.900 - 2.100 |
R-factor | 0.19635 |
Rwork | 0.194 |
R-free | 0.24333 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ubq |
RMSD bond length | 0.008 |
RMSD bond angle | 1.423 |
Data reduction software | MOSFLM |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.900 | 2.210 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.080 | 0.250 |
Number of reflections | 12924 | |
<I/σ(I)> | 9.58 | 4.6 |
Completeness [%] | 96.3 | 97.48 |
Redundancy | 3.33 | 3.34 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 289 | 0.2 M magnesium acetate tetrahydrate, 20% w/v Polyethylene glycol 3350 |