4X41
Crystal Structure of Protein Arginine Methyltransferase PRMT8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-05-22 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 1.0 |
Spacegroup name | P 2 2 21 |
Unit cell lengths | 68.159, 78.236, 203.861 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.727 - 3.500 |
R-factor | 0.2339 |
Rwork | 0.231 |
R-free | 0.28200 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.019 |
Data reduction software | SCALA |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (dev_1819) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 3.620 |
High resolution limit [Å] | 3.500 | 7.420 | 3.500 |
Rmerge | 0.196 | 0.064 | 0.478 |
Rmeas | 0.239 | 0.078 | 0.586 |
Rpim | 0.133 | 0.043 | 0.332 |
Total number of observations | 38801 | ||
Number of reflections | 13561 | ||
<I/σ(I)> | 5.7 | ||
Completeness [%] | 94.7 | 88.8 | 97.1 |
Redundancy | 2.9 | 2.7 | 2.8 |
CC(1/2) | 0.993 | 0.692 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 150mM D-glucose, 100mM HEPES/MOPS pH7.5, 40% Glycerol/PEG4000 |