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4WI1

Crystal Structure of Prolyl-tRNA synthetase (ProRS, Proline--tRNA ligase) from Plasmodium falciparum in complex with TCMDC-124506

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyCCD
Collection date2014-09-18
DetectorRAYONIX MX-225
Wavelength(s)0.979490
Spacegroup nameC 1 2 1
Unit cell lengths148.180, 91.340, 110.910
Unit cell angles90.00, 129.53, 90.00
Refinement procedure
Resolution40.288 - 1.650
R-factor0.162
Rwork0.162
R-free0.18790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4q15
RMSD bond length0.007
RMSD bond angle1.047
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: dev_1803))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0001.690
High resolution limit [Å]1.6507.3801.650
Rmerge0.0490.0300.539
Rmeas0.0560.0350.615
Total number of observations564551
Number of reflections13346812919725
<I/σ(I)>16.3132.943.01
Completeness [%]97.279.496.2
Redundancy4.14.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5289at 21.9mg/ml, incubated with 5mM TCMDC-124506, then 1:1 with Morpheus(B2): 10% PEG-8000, 20% ethylene glycol, 0.1M MES/imidazole, pH=6.5, 0.03M each magnesium chloride, calcium chloride

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