4U03
Structure of the vibrio cholerae di-nucleotide cyclase (DncV) in complex with GTP and 5MTHFGLU2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-05-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.968 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 69.623, 59.846, 104.053 |
Unit cell angles | 90.00, 95.81, 90.00 |
Refinement procedure
Resolution | 43.633 - 2.041 |
R-factor | 0.183 |
Rwork | 0.180 |
R-free | 0.23330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4u0l |
RMSD bond length | 0.007 |
RMSD bond angle | 1.143 |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 103.000 |
High resolution limit [Å] | 2.040 |
Number of reflections | 54229 |
<I/σ(I)> | 16.9 |
Completeness [%] | 99.0 |
Redundancy | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 20% w/v PEG 3350, 200mM NaCl, 5mM ATP, 5mM GTP |