4TZ4
Crystal Structure of Human Cereblon in Complex with DDB1 and Lenalidomide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CLSI BEAMLINE 08ID-1 |
| Synchrotron site | CLSI |
| Beamline | 08ID-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-01-15 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 1.00 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 71.862, 129.117, 198.677 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 50.000 - 3.010 |
| R-factor | 0.2049 |
| Rwork | 0.202 |
| R-free | 0.27060 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | DDB1 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.211 |
| Data reduction software | HKL-3000 |
| Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 3.120 |
| High resolution limit [Å] | 3.010 | 6.480 | 3.010 |
| Rmerge | 0.181 | 0.082 | 0.723 |
| Total number of observations | 228575 | ||
| Number of reflections | 37313 | ||
| <I/σ(I)> | 5.9 | ||
| Completeness [%] | 98.5 | 99.5 | 85.8 |
| Redundancy | 6.1 | 5.6 | 5.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 100mM HEPES pH 7.5, 18% PEG 10K |






