4RJF
Crystal structure of the human sliding clamp at 2.0 angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-07-22 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 3 |
Unit cell lengths | 142.970, 142.970, 41.410 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.272 - 2.007 |
R-factor | 0.1546 |
Rwork | 0.148 |
R-free | 0.18870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1axc |
RMSD bond length | 0.002 |
RMSD bond angle | 0.631 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.1.27) |
Phasing software | PHASER (2.5.1) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.410 | 41.410 | 2.060 |
High resolution limit [Å] | 2.007 | 9.190 | 2.007 |
Rmerge | 0.055 | 0.024 | 0.449 |
Total number of observations | 4879 | 28350 | |
Number of reflections | 63388 | ||
<I/σ(I)> | 25 | 83.8 | 3.8 |
Completeness [%] | 100.0 | 98.9 | 99.9 |
Redundancy | 7.1 | 7.4 | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 289 | 0.08M strontium chloride hexahydrate, 0.02M magnesium chloride hexahydrate, 0.04M sodium cacodylate trihydrate (pH7.0), 20% v/v (+/-)-2-methyl-2,4-pentanediol and 0.012M spermine tetrahydrochloride, final [PCNA] = 11.6mg/mL = 0.40mM, VAPOR DIFFUSION, SITTING DROP, temperature 289K |