4PX6
SYK catalytic domain in complex with a potent pyridopyrimidinone inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 8-BM |
Synchrotron site | APS |
Beamline | 8-BM |
Temperature [K] | 200 |
Detector technology | CCD |
Detector | ADSC QUANTUM 315 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 39.889, 85.161, 88.961 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.370 - 1.600 |
R-factor | 0.1761 |
Rwork | 0.175 |
R-free | 0.20200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1xba |
RMSD bond length | 0.010 |
RMSD bond angle | 0.950 |
Phasing software | REFMAC |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 85.160 | 1.690 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.035 | 0.397 |
Number of reflections | 240351 | |
<I/σ(I)> | 24.4 | 2.2 |
Completeness [%] | 93.1 | 85.3 |
Redundancy | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.2 | 293 | 20% PEG3350, 0.2M ammonium fluoride, pH 6.2, VAPOR DIFFUSION, SITTING DROP, temperature 293K |