4PE5
Crystal Structure of GluN1a/GluN2B NMDA Receptor Ion Channel
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-12-07 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0332 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 116.825, 163.186, 163.137 |
Unit cell angles | 90.00, 93.81, 90.00 |
Refinement procedure
Resolution | 29.717 - 3.960 |
R-factor | 0.2583 |
Rwork | 0.256 |
R-free | 0.29530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ENTRIES 3QEL 2a5t |
RMSD bond length | 0.002 |
RMSD bond angle | 0.614 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 4.090 |
High resolution limit [Å] | 3.950 | 8.500 | 3.950 |
Rmerge | 0.087 | 0.050 | |
Total number of observations | 197482 | ||
Number of reflections | 52241 | ||
<I/σ(I)> | 9.3 | ||
Completeness [%] | 98.6 | 90.9 | 99.4 |
Redundancy | 3.8 | 3.1 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.8 | 291 | PEG 4000, Tris-HCl, NaCl, Magnesium acetate, metatungstate |