4OGW
Structure of a human CD38 mutant complexed with NMN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2009-03-31 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.341, 64.467, 73.501 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.450 - 2.050 |
R-factor | 0.20092 |
Rwork | 0.198 |
R-free | 0.26185 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yh3 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.054 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.450 | 2.107 |
High resolution limit [Å] | 2.050 | 2.054 |
Rmerge | 0.063 | 0.187 |
Number of reflections | 14373 | |
<I/σ(I)> | 38.8 | 9.8 |
Completeness [%] | 99.7 | 96.06 |
Redundancy | 6.8 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 295 | 23% PEG3350, 0.1M Bis-Tris-Propane, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K |