Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4N39

Crystal structure of human O-GlcNAc transferase bound to a peptide from HCF-1 pro-repeat 2 (11-26)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2011-07-19
DetectorADSC QUANTUM 315r
Wavelength(s)1.075
Spacegroup nameP 32 2 1
Unit cell lengths101.170, 101.170, 131.730
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution33.116 - 1.760
R-factor0.1887
Rwork0.187
R-free0.21580
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.899
Data reduction softwareiMOSFLM
Data scaling softwareSCALA (3.3.16)
Phasing softwarePHENIX
Refinement softwarePHENIX (1.8.1_1168)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]87.61633.1161.860
High resolution limit [Å]1.7605.5701.760
Rmerge0.0440.628
Total number of observations1210458259
Number of reflections77414
<I/σ(I)>9.1141.1
Completeness [%]99.692.3100
Redundancy5.14.95.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52981.5 M Potassium Sodium Tartrate, 0.1M Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon