4MZF
Crystal structure of human Spindlin1 bound to histone H3(K4me3-R8me2a) peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 77 |
Detector technology | CCD |
Collection date | 2012-07-12 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9794 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 120.679, 43.309, 50.150 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.778 - 2.098 |
R-factor | 0.205 |
Rwork | 0.201 |
R-free | 0.25520 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.182 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.740 | 2.140 |
High resolution limit [Å] | 2.098 | 2.650 | 2.098 |
Rmerge | 0.091 | 0.179 | 0.592 |
Number of reflections | 15029 | ||
<I/σ(I)> | 28.47 | 12.56 | 3.74 |
Completeness [%] | 94.0 | 94.9 | 90.5 |
Redundancy | 4.6 | 4.4 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291.15 | 20% PEG 8000, 20% PEG 400, 0.1M MgCl2, 0.1M Tris-HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 291.15K |