4MR6
Crystal Structure of the second bromodomain of human BRD2 in complex with a quinazolinone ligand (RVX-208)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-06-21 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.52 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 32.118, 52.692, 72.119 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.600 - 1.670 |
R-factor | 0.1568 |
Rwork | 0.155 |
R-free | 0.19320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3oni |
RMSD bond length | 0.015 |
RMSD bond angle | 1.588 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER (2.3.0) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.600 | 19.600 | 1.760 |
High resolution limit [Å] | 1.670 | 5.270 | 1.670 |
Rmerge | 0.119 | 0.038 | 0.703 |
Number of reflections | 13910 | ||
<I/σ(I)> | 11.8 | 29.1 | 2 |
Completeness [%] | 93.9 | 97.6 | 93.9 |
Redundancy | 4.8 | 4.2 | 4.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 25% PEG3350, 0.2M KSCN, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K |