4MHA
Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC1817
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-04-08 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.03320 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 51.142, 91.460, 69.932 |
Unit cell angles | 90.00, 100.23, 90.00 |
Refinement procedure
Resolution | 40.066 - 2.590 |
R-factor | 0.2465 |
Rwork | 0.241 |
R-free | 0.29390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tcp |
RMSD bond length | 0.002 |
RMSD bond angle | 0.477 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: dev_1468)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.070 | 2.610 |
High resolution limit [Å] | 2.590 | 2.590 |
Rmerge | 0.117 | 0.711 |
Number of reflections | 19608 | |
<I/σ(I)> | 11.8 | 2 |
Completeness [%] | 99.7 | 97.4 |
Redundancy | 4.2 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 288 | Protein: 32.5 mg/mL in 20 mM Tris pH 8.0, 500mM sodium chloride, 2mM beta-mercaptoethanol, incubated with inhibitor (2.5 mM final concentration) overnight, mixed 1:1 with crystallization solution (27-33% (v/v) Peg400, 200 mM magnesium chloride, 100 mM Tris pH 8.5), VAPOR DIFFUSION, SITTING DROP, temperature 288K |