4LZG
Binary complex of human DNA Polymerase Mu with DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2012-10-28 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.003, 68.514, 110.307 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.932 - 1.599 |
R-factor | 0.175 |
Rwork | 0.174 |
R-free | 0.20460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | hPol Mu Loop2 truncation variant in ternary complex with single-nucleotide gapped DNA |
RMSD bond length | 0.011 |
RMSD bond angle | 1.448 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.630 |
High resolution limit [Å] | 1.599 | 4.340 | 1.599 |
Rmerge | 0.042 | 0.272 | |
Number of reflections | 60033 | ||
<I/σ(I)> | 13.8 | ||
Completeness [%] | 98.6 | 99.7 | 83.1 |
Redundancy | 6.2 | 6.8 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | Crystals were grown by mixing 1uL of the protein/DNA complex with 1uL of mother liquor (85mM MES pH 6.5, 85mMCaCl2, 42.5mM NaCl, 8.5% PEG3350, 11% glycerol), using the sitting drop vapor diffusion technique. Crystals were transferred to a cryoprotectant solution containing 0.1M MES pH 6.5, 0.1M CaCl2, 50mM NaCl, 10mM MgCl2, 20% PEG3350, 15% glycerol in three steps. , VAPOR DIFFUSION, SITTING DROP, temperature 277K |