Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4LZG

Binary complex of human DNA Polymerase Mu with DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]93
Detector technologyCCD
Collection date2012-10-28
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths60.003, 68.514, 110.307
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.932 - 1.599
R-factor0.175
Rwork0.174
R-free0.20460
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)hPol Mu Loop2 truncation variant in ternary complex with single-nucleotide gapped DNA
RMSD bond length0.011
RMSD bond angle1.448
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8_1069)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.630
High resolution limit [Å]1.5994.3401.599
Rmerge0.0420.272
Number of reflections60033
<I/σ(I)>13.8
Completeness [%]98.699.783.1
Redundancy6.26.82.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5277Crystals were grown by mixing 1uL of the protein/DNA complex with 1uL of mother liquor (85mM MES pH 6.5, 85mMCaCl2, 42.5mM NaCl, 8.5% PEG3350, 11% glycerol), using the sitting drop vapor diffusion technique. Crystals were transferred to a cryoprotectant solution containing 0.1M MES pH 6.5, 0.1M CaCl2, 50mM NaCl, 10mM MgCl2, 20% PEG3350, 15% glycerol in three steps. , VAPOR DIFFUSION, SITTING DROP, temperature 277K

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon