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4L4M

Structural Analysis of a Phosphoribosylated Inhibitor in Complex with Human Nicotinamide Phosphoribosyltransferase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]93
Detector technologyPIXEL
Collection date2013-04-03
DetectorPSI PILATUS 6M
Wavelength(s)0.97950
Spacegroup nameP 1 21 1
Unit cell lengths60.579, 107.056, 82.998
Unit cell angles90.00, 96.47, 90.00
Refinement procedure
Resolution37.098 - 2.445
R-factor0.2101
Rwork0.208
R-free0.25140
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.701
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.540
High resolution limit [Å]2.4452.450
Number of reflections37802
Completeness [%]97.196.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.62920.2uL + 0.2uL drops containing 6mg/mL Nampt, 0.1M Sodium phosphate, 25-29% polyethylene glycol 3350, 0.2M NaCl, 1mM ligand compound, pH 8.6, VAPOR DIFFUSION, HANGING DROP, temperature 292K, VAPOR DIFFUSION, SITTING DROP

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