4K95
Crystal Structure of Parkin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CHESS BEAMLINE F2 |
| Synchrotron site | CHESS |
| Beamline | F2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-06-11 |
| Detector | ADSC QUANTUM 210 |
| Wavelength(s) | 0.9183 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 208.598, 277.439, 125.891 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 49.334 - 6.499 |
| R-factor | 0.3078 |
| Rwork | 0.307 |
| R-free | 0.32660 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | PDB entries: 4K7D (rat parkin 141-465) and 2ZEQ (mouse parkin 1-72) |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.174 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 6.730 |
| High resolution limit [Å] | 6.500 | 13.910 | 6.500 |
| Rmerge | 0.172 | 0.080 | 0.805 |
| Number of reflections | 14922 | ||
| <I/σ(I)> | 15.1 | 40.1 | 2.5 |
| Completeness [%] | 99.8 | 98.9 | 100 |
| Redundancy | 7.2 | 6.1 | 7.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 22.5% PEG3350, 0.2 M (NH4)2SO4, 0.1 M HEPES pH 7.0, 10% (v/v) glycerol, 3% sorbitol and 25 mM 2-mercaptoethanol, vapor diffusion, hanging drop, temperature 277K |






