4K95
Crystal Structure of Parkin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F2 |
Synchrotron site | CHESS |
Beamline | F2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-06-11 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.9183 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 208.598, 277.439, 125.891 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.334 - 6.499 |
R-factor | 0.3078 |
Rwork | 0.307 |
R-free | 0.32660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries: 4K7D (rat parkin 141-465) and 2ZEQ (mouse parkin 1-72) |
RMSD bond length | 0.011 |
RMSD bond angle | 1.174 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 6.730 |
High resolution limit [Å] | 6.500 | 13.910 | 6.500 |
Rmerge | 0.172 | 0.080 | 0.805 |
Number of reflections | 14922 | ||
<I/σ(I)> | 15.1 | 40.1 | 2.5 |
Completeness [%] | 99.8 | 98.9 | 100 |
Redundancy | 7.2 | 6.1 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 22.5% PEG3350, 0.2 M (NH4)2SO4, 0.1 M HEPES pH 7.0, 10% (v/v) glycerol, 3% sorbitol and 25 mM 2-mercaptoethanol, vapor diffusion, hanging drop, temperature 277K |